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      Genetic variants in genes can influence phenotype

      Lesson details

      Learning outcome

      I can explain how a genetic variant in a gene can influence an organism’s phenotype.

      Key learning points

      1. When a mutation changes the sequence of nucleotide bases in a gene, this creates a genetic variant of the gene.
      2. If a triplet code in a gene is changed, this may or may not change the amino acid sequence in the protein that is made.
      3. A change in the amino acid sequence of a protein can change the 3D shape of the protein.
      4. A change in the 3D shape of a protein can change what it does (e.g. by changing the shape of an enzyme’s active site).
      5. These changes can have impacts on an organism’s phenotype.

      Keywords

      • Gene - A gene is a section of DNA that holds the genetic code for a protein.

      • Genetic variant - A genetic variant is produced when a mutation causes a change in the genetic sequence of a gene or non-coding DNA.

      • Allele - A genetic variant in a gene creates an allele (a different version of the gene), which produces a different phenotype.

      • Triplet code - The triplet code is carried by genes. Each three nucleotide bases codes for a specific amino acid.

      • Phenotype - The phenotype is the physical characteristics of an organism.

      Common misconception

      Mutations always have a negative effect on an organism.

      Mutations can produce variation in a phenotype by producing alleles of a gene.

      Teacher tip

      Pupils can research phenotypes and look at multiple alleles in colour or changes that lead to genetic disorders.

      Licence

      This content is © Oak National Academy Limited (2025), licensed on Open Government Licence version 3.0
      except where otherwise stated. See Oak's terms & conditions
      (Collection 2).

      Lesson video

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      Prior knowledge starter quiz

      6 Questions

      Q1.
      Match each of the following to the correct number.

      Correct Answer:1,the number of amino acids coded for by each triplet of bases

      the number of amino acids coded for by each triplet of bases

      Correct Answer:2,the number of nucleic acid strands in a DNA molecule

      the number of nucleic acid strands in a DNA molecule

      Correct Answer:3,the number of nucleotide bases in one triplet code

      the number of nucleotide bases in one triplet code

      Correct Answer:4,the number of different nucleotide bases found in DNA

      the number of different nucleotide bases found in DNA

      Q2.
      If a single nucleotide base in DNA is swapped for another one, this is called a substitution .

      Correct Answer: mutation

      Q3.
      What is the cause of most mutations in DNA?

      chemical mutations in cigarette smoke
      Correct answer: errors in copying DNA when cells divide
      high-energy ultraviolet radiation
      X-ray radiation

      Q4.
      This is part of a genetic code: TAC CAG TCA CAG. A mutation changes the code to TAC CAG TCC AG. What kind of mutation has taken place?

      Correct Answer: deletion

      Q5.
      Insertion mutations have a greater effect on the genetic code than substitution mutations. Why?

      Insertion mutations remove a base from a triplet code.
      Correct answer: Insertion mutations add a base to a triplet code.
      Insertion mutations change every triplet code before the mutation.
      Correct answer: Insertion mutations change every triplet code after the mutation.
      Insertion mutations swap one base for another in a triplet code.

      Q6.
      In which type of cell would a mutation have to happen if the mutation was to be inherited by a person’s offspring?

      Correct answer: gamete cell
      nerve cell
      red blood cell
      root hair cell

      6 Questions

      Q1.
      Which word means the physical characteristics of an organism?

      genome
      Correct answer: phenotype
      polymer
      ribosome
      transcription

      Q2.
      A different version of a gene, created by a mutation, is called an .

      Correct Answer: allele

      Q3.
      Match each word to its correct definition.

      Correct Answer:gene,a section of DNA that holds the genetic code for a protein

      a section of DNA that holds the genetic code for a protein

      Correct Answer:genetic variant,a section of DNA in which a mutation has changed the base sequence

      a section of DNA in which a mutation has changed the base sequence

      Correct Answer:allele,a different version of a gene, created by a mutation

      a different version of a gene, created by a mutation

      Correct Answer:triplet code,a set of three nucleotide bases that codes for one amino acid

      a set of three nucleotide bases that codes for one amino acid

      Q4.
      Match each mutation to the change it would cause in the amino acid sequence of the protein coded for by a gene.

      An image in a quiz
      Correct Answer:GAT mutated to GGT,would change leucine to proline

      would change leucine to proline

      Correct Answer:CAT mutated to CAA,no change in amino acid

      no change in amino acid

      Correct Answer:CAC mutated to GAC,would change valine to leucine

      would change valine to leucine

      Correct Answer:CAA mutated to GGA,would change valine to proline

      would change valine to proline

      Q5.
      Put the steps in the correct order to describe how a mutation in a gene can change an organism’s phenotype.

      1 - A mutation changes the sequence of bases in a gene.
      2 - The gene is transcribed to make mRNA.
      3 - Translation takes place at a ribosome, when tRNA joins amino acids together.
      4 - The amino acid chain folds to make a protein.
      5 - The protein folds differently because one or more amino acids has been changed.
      6 - The protein structure is changed, so it might not work properly.

      Q6.
      Who identifies a mutation that is the most likely to result in a non-functional protein?

      Izzy: “A substitution mutation in a gene.”
      Correct answer: Jun: “A deletion mutation in a gene.”
      Sam: “A substitution mutation in non-coding DNA.”
      Sofia: “A mutagen in a gene.”

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